STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAH12Dynein axonemal heavy chain 12. (3187 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
    
 0.917
DNAI1
Dynein axonemal intermediate chain 1.
  
 0.824
DNAL4
Dynein axonemal light chain 4.
    
 0.747
WDR78
WD repeat domain 78.
   
 0.745
TBC1D31
TBC1 domain family member 31.
    
 0.738
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.736
WDR63
WD repeat domain 63.
   
 0.733
DCTN2
Dynactin subunit 2.
    
 0.718
DYNLT1
Dynein light chain Tctex-type 1.
    
 0.713
DYNLT3
Dynein light chain Tctex-type 3.
    
 0.713
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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