STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSC22D2TSC22 domain family member 2. (792 aa)    
Predicted Functional Partners:
NRBP1
Nuclear receptor binding protein 1.
    
 
 0.797
LOC106900055
Serine/threonine-protein kinase Sgk3-like.
    
  0.673
LOC106886558
Serine/threonine-protein kinase Sgk3.
    
  0.673
STAC
SH3 and cysteine rich domain.
      
 0.524
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
  0.510
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
  0.510
KSR2
Kinase suppressor of ras 2.
    
  0.510
KSR1
Kinase suppressor of ras 1.
    
  0.510
NEK10
NIMA related kinase 10.
    
 0.469
UBE4A
Ubiquitination factor E4A.
      
 0.439
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.