STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000024932annotation not available (197 aa)    
Predicted Functional Partners:
CEP97
Centrosomal protein 97.
   
 0.921
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.807
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.804
CEP290
Centrosomal protein 290.
    
 
 0.802
RIMKLB
Ribosomal modification protein rimK like family member B.
  
 
 0.786
CCNF
Cyclin F.
    
 
 0.734
TMEM181
Transmembrane protein 181.
  
 0.734
GCLM
Glutamate-cysteine ligase modifier subunit.
   
  0.727
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 
  0.727
GSS
Glutathione synthetase.
     
 0.717
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.