STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106899381arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like. (808 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6.
    
 0.820
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
  
 
 
0.809
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
0.745
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
   
 
 0.715
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
   
 
 0.715
EXOC7
Exocyst complex component 7.
     
 0.691
RAB11FIP3
RAB11 family interacting protein 3.
    
 0.624
EXOC5
Exocyst complex component 5.
     
 0.601
EXOC1
Exocyst complex component 1.
   
 
  0.581
SMAP1
Small ArfGAP 1.
    
0.580
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.