STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106890179Intestinal-type alkaline phosphatase-like. (520 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
     
 0.796
ALPL
Alkaline phosphatase, biomineralization associated.
  
  
 
0.789
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.784
ACP1
Acid phosphatase 1.
    
 0.783
GCH1
GTP cyclohydrolase 1.
   
 
  0.777
NADK
NAD kinase.
   
 
  0.776
CPPED1
Calcineurin like phosphoesterase domain containing 1.
  
 
 0.774
MINPP1
Multiple inositol-polyphosphate phosphatase 1.
   
 
 0.719
ENSCPUP00000021415
annotation not available
    
 0.711
NUDT15
Nudix hydrolase 15.
    
  0.698
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.