STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP63Tumor protein p63. (586 aa)    
Predicted Functional Partners:
ENSCPUP00000006979
annotation not available
  
 
0.961
TP73
Tumor protein p73.
  
 
0.961
MDM2
MDM2 proto-oncogene.
    
 0.882
ENSCPUP00000021718
annotation not available
   
 0.880
RCHY1
Ring finger and CHY zinc finger domain containing 1.
    
 0.880
CHEK2
Checkpoint kinase 2.
    
 0.874
WRN
WRN RecQ like helicase.
    
 0.874
ATR
ATR serine/threonine kinase.
    
 0.858
CHEK1
Checkpoint kinase 1.
    
 0.840
EP300
E1A binding protein p300.
    
 0.838
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.