STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HES1Hes family bHLH transcription factor 1. (323 aa)    
Predicted Functional Partners:
FANCF
FA complementation group F.
    
 0.940
FANCL
FA complementation group L.
    
 0.940
FANCG
FA complementation group G.
    
 0.939
FANCA
FA complementation group A.
    
 0.939
FANCC
FA complementation group C.
    
  0.938
FANCE
FA complementation group E.
    
  0.890
RPL10A
Ribosomal protein L10a.
    
  0.867
HES6
Hes family bHLH transcription factor 6.
    
0.840
HES5
Transcription factor HES-5-like.
    
0.797
UBE2T
Ubiquitin conjugating enzyme E2 T.
    
  0.791
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.