STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQP2Aquaporin 2. (274 aa)    
Predicted Functional Partners:
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
   
 
 0.808
KATNAL2
Katanin catalytic subunit A1 like 2.
  
 0.713
KATNAL1
Katanin catalytic subunit A1 like 1.
  
 0.697
KATNA1
Katanin catalytic subunit A1.
  
 0.697
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
  
 0.682
PSMC1
Proteasome 26S subunit, ATPase 1.
  
 
 0.672
ENSCPUP00000006277
annotation not available
  
 
 0.672
ENSCPUP00000006278
annotation not available
  
 
 0.672
ATAD2
ATPase family AAA domain containing 2.
  
 
 0.672
GK
Glycerol kinase.
  
 
 0.672
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.