STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000025852annotation not available (301 aa)    
Predicted Functional Partners:
ENSCPUP00000000773
annotation not available
    
  0.762
GNA12
G protein subunit alpha 12.
    
 0.669
GNA13
G protein subunit alpha 13.
    
 0.661
LOC106902922
Vasotocin-neurophysin VT.
    
  0.599
GNAL
G protein subunit alpha L.
    
 0.587
ENSCPUP00000009624
annotation not available
    
 0.587
GNAS
GNAS complex locus.
    
 0.587
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.580
GNA14
Guanine nucleotide-binding protein subunit alpha-14.
    
 0.580
GNAQ
G protein subunit alpha q.
    
 0.580
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.