STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRTCAP3Keratinocyte associated protein 3. (190 aa)    
Predicted Functional Partners:
PTPN3
Protein tyrosine phosphatase non-receptor type 3.
      
 0.519
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.518
LOC106901091
Retinoic acid-induced protein 3-like.
      
 0.473
LOC106902384
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like.
      
 0.437
KIF16B
Kinesin family member 16B.
      
 0.406
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.