STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLPSColipase. (115 aa)    
Predicted Functional Partners:
LOC106889795
Pancreatic lipase-related protein 3-like.
   
 0.929
LOC106889796
Pancreatic lipase-related protein 3-like.
   
 0.929
ENSCPUP00000005927
annotation not available
   
 0.920
LOC106897180
Pancreatic lipase-related protein 2-like.
   
 0.915
LOC106889818
Inactive pancreatic lipase-related protein 1-like.
   
 0.915
CEL
Bile salt-activated lipase-like.
   
  
 0.885
LIPC
Lipase C, hepatic type.
    
 0.612
TBX22
T-box transcription factor 22.
      
 0.537
ENSCPUP00000000422
annotation not available
    
  0.514
LOC106896038
Zinc finger protein 777-like.
    
  0.514
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.