STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX22T-box transcription factor 22. (469 aa)    
Predicted Functional Partners:
RGS9BP
Regulator of G protein signaling 9 binding protein.
   
    0.686
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
      
 0.558
CLPS
Colipase.
      
 0.537
ENSCPUP00000021415
annotation not available
      
 0.453
TLX1
T cell leukemia homeobox 1.
   
 
 0.452
BARX1
BARX homeobox 1.
   
 
 0.450
ENSCPUP00000006135
annotation not available
   
 
 0.448
ENSCPUP00000004272
annotation not available
    
 
 0.429
HMX3
H6 family homeobox 3.
    
 
 0.429
PTN
Pleiotrophin.
      
 0.422
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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