STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLTAClathrin light chain A. (226 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
    
 0.999
ENSCPUP00000006684
annotation not available
    
 0.986
LOC106897508
Intersectin-2-like.
    
 0.986
CLTC
Clathrin heavy chain.
   
 0.982
ITSN1
Intersectin 1.
    
 0.980
CLTCL1
Clathrin heavy chain 2-like.
   
 0.978
SORL1
Sortilin related receptor 1.
    
 0.974
EPN2
Epsin 2.
    
 0.948
HIP1
Huntingtin interacting protein 1.
    
 0.945
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 0.940
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.