STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAPANSF attachment protein alpha. (355 aa)    
Predicted Functional Partners:
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.986
SNAP25
Synaptosome associated protein 25.
   
 0.984
SCFD1
Sec1 family domain containing 1.
    
 0.971
STX16
Syntaxin 16.
    
 0.971
GAK
Cyclin G associated kinase.
    
  0.967
YKT6
YKT6 v-SNARE homolog.
    
 0.960
VAMP8
Vesicle associated membrane protein 8.
    
 0.959
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.953
STX6
Syntaxin 6.
    
 0.949
STX8
Syntaxin 8.
    
 0.947
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.