STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRCCProline rich mitotic checkpoint control factor. (549 aa)    
Predicted Functional Partners:
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.978
SNW1
SNW domain containing 1.
     
 0.967
PPIE
Peptidylprolyl isomerase E.
    
 0.961
ZNF830
Zinc finger protein 830.
   
 
 0.948
PPIL2
Peptidylprolyl isomerase like 2.
   
 0.859
PRPF19
pre-mRNA processing factor 19.
    
 
 0.686
PPIL3
Peptidylprolyl isomerase like 3.
    
 0.631
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
      
 0.597
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
 0.562
PPIG
Peptidylprolyl isomerase G.
    
 0.551
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.