STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRAXINDorsal inhibitory axon guidance protein. (320 aa)    
Predicted Functional Partners:
NEO1
Neogenin 1.
    
 
 0.780
NTN1
Netrin 1.
    
 
 0.773
NTN3
Netrin 3.
    
 
 0.762
ENSCPUP00000015662
annotation not available
    
 
 0.741
DCC
DCC netrin 1 receptor.
    
 
 0.741
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
    
 
 0.703
NTNG1
Netrin G1.
    
 
 0.682
SPICE1
Spindle and centriole associated protein 1.
   
    0.675
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
    
 
 0.669
NTNG2
Netrin G2.
    
 
 0.628
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.