STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPR1Natriuretic peptide receptor 1. (1099 aa)    
Predicted Functional Partners:
NPPC
Natriuretic peptide C.
    
 0.936
NPPB
Natriuretic peptide A.
    
 0.922
PDE5A
Phosphodiesterase 5A.
    
 0.847
ENSCPUP00000000773
annotation not available
     
 0.841
PDE2A
Phosphodiesterase 2A.
    
 0.841
AK9
Adenylate kinase 9.
     
 0.841
PDE11A
Phosphodiesterase 11A.
    
 0.838
PDE6B
Phosphodiesterase 6B.
    
 0.838
PDE10A
Phosphodiesterase 10A.
    
 0.838
PDE9A
Phosphodiesterase 9A.
    
 0.838
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.