ENSCPUP00000027841 protein (Calidris pugnax)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCPUP00000027841

annotation not available (207 aa)

Predicted Functional Partners:

MYSM1

0.861

SMARCB1

0.826

ACTL6A

0.822

PBRM1

0.819

SMARCE1

0.804

PHF10

0.783

ARID2

0.756

SMARCD1

0.713

SMARCD3

0.713

SMARCD2

0.713

Your Current Organism:

Calidris pugnax

NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ARID2	ENSCPUP00000016177	ENSCPUP00000006951	Actin like 6A.	AT-rich interaction domain 2.	0.989
ACTL6A	ENSCPUP00000027841	ENSCPUP00000016177	ENSCPUP00000027841	Actin like 6A.	annotation not available	0.822
ACTL6A	MYSM1	ENSCPUP00000016177	ENSCPUP00000016758	Actin like 6A.	Histone H2A deubiquitinase MYSM1.	0.985
ACTL6A	PBRM1	ENSCPUP00000016177	ENSCPUP00000010449	Actin like 6A.	Polybromo 1.	0.998
ACTL6A	PHF10	ENSCPUP00000016177	ENSCPUP00000017455	Actin like 6A.	PHD finger protein 10.	0.997
ACTL6A	SMARCB1	ENSCPUP00000016177	ENSCPUP00000008550	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.998
ACTL6A	SMARCD1	ENSCPUP00000016177	ENSCPUP00000007589	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.970
ACTL6A	SMARCD2	ENSCPUP00000016177	ENSCPUP00000020896	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.989
ACTL6A	SMARCD3	ENSCPUP00000016177	ENSCPUP00000010009	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.970
ACTL6A	SMARCE1	ENSCPUP00000016177	ENSCPUP00000000515	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.997
ARID2	ACTL6A	ENSCPUP00000006951	ENSCPUP00000016177	AT-rich interaction domain 2.	Actin like 6A.	0.989
ARID2	ENSCPUP00000027841	ENSCPUP00000006951	ENSCPUP00000027841	AT-rich interaction domain 2.	annotation not available	0.756
ARID2	MYSM1	ENSCPUP00000006951	ENSCPUP00000016758	AT-rich interaction domain 2.	Histone H2A deubiquitinase MYSM1.	0.938
ARID2	PBRM1	ENSCPUP00000006951	ENSCPUP00000010449	AT-rich interaction domain 2.	Polybromo 1.	0.999
ARID2	PHF10	ENSCPUP00000006951	ENSCPUP00000017455	AT-rich interaction domain 2.	PHD finger protein 10.	0.996
ARID2	SMARCB1	ENSCPUP00000006951	ENSCPUP00000008550	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.998
ARID2	SMARCD1	ENSCPUP00000006951	ENSCPUP00000007589	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.958
ARID2	SMARCD2	ENSCPUP00000006951	ENSCPUP00000020896	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.984
ARID2	SMARCD3	ENSCPUP00000006951	ENSCPUP00000010009	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.958
ARID2	SMARCE1	ENSCPUP00000006951	ENSCPUP00000000515	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.998