STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPLA1Lysophospholipase 1. (206 aa)    
Predicted Functional Partners:
PLA2G2E
Group IIE secretory phospholipase A2-like.
     
 0.872
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
    
 0.863
LPCAT3
Lysophosphatidylcholine acyltransferase 3.
   
 
 0.853
PLA2G15
Phospholipase A2 group XV.
     
 0.850
ENSCPUP00000002069
annotation not available
     
 0.849
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
    
 0.848
PLA2G4A
Phospholipase A2 group IVA.
     
 0.842
LCAT
Lecithin-cholesterol acyltransferase.
     
 0.842
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
    
 0.841
PLA2G6
Phospholipase A2 group VI.
    
 0.840
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.