STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIF5BKinesin family member 5B. (928 aa)    
Predicted Functional Partners:
KLC4
Kinesin light chain 4.
    
 0.951
KLC1
Kinesin light chain 1.
    
 0.940
KDM6A
Lysine demethylase 6A.
   
 0.912
NPHP3
Nephrocystin 3.
    
 0.891
ROCK2
Rho associated coiled-coil containing protein kinase 2.
   
  0.841
KIF5C
Kinesin family member 5C.
  
  
 
0.837
KIF21A
Kinesin family member 21A.
    
0.829
KIF3A
Kinesin family member 3A.
   
0.819
GSK3B
Glycogen synthase kinase 3 beta.
   
  0.816
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.815
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.