STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106889796Pancreatic lipase-related protein 3-like. (355 aa)    
Predicted Functional Partners:
CLPS
Colipase.
   
 0.929
CEL
Bile salt-activated lipase-like.
   
 0.849
LIPC
Lipase C, hepatic type.
  
 
 
0.800
PLPP4
Phospholipid phosphatase 4.
    
  0.796
AGK
Acylglycerol kinase.
    
  0.794
LIPG
Lipase G, endothelial type.
  
  
 
0.787
MOGAT2
Monoacylglycerol O-acyltransferase 2.
     
 0.780
DGAT2
Diacylglycerol O-acyltransferase 2.
     
 0.780
LOC106895530
Diacylglycerol O-acyltransferase 2-like.
     
 0.780
LPL
Lipoprotein lipase.
  
  
 
0.779
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.