STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCRS1Microspherule protein 1. (306 aa)    
Predicted Functional Partners:
KANSL3
KAT8 regulatory NSL complex subunit 3.
   
 0.988
KANSL2
KAT8 regulatory NSL complex subunit 2.
  
 0.987
PHF20
PHD finger protein 20.
    
 0.985
KANSL1
KAT8 regulatory NSL complex subunit 1.
    
 0.984
INO80C
INO80 complex subunit C.
   
 0.975
INO80
INO80 complex ATPase subunit.
    
 0.975
RUVBL2
ruvB-like 2.
   
 0.971
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.969
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
     
 0.968
BAP1
BRCA1 associated protein 1.
   
  0.966
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.