STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WNK1WNK lysine deficient protein kinase 1. (2672 aa)    
Predicted Functional Partners:
MED17
Mediator complex subunit 17.
    
 0.945
MED14
Mediator complex subunit 14.
    
 0.945
MED7
Mediator complex subunit 7.
    
 0.937
MED6
Mediator complex subunit 6.
    
 0.924
MED10
Mediator complex subunit 10.
    
 0.921
MED31
Mediator complex subunit 31.
    
 0.920
PNPLA8
Patatin like phospholipase domain containing 8.
    
 0.914
MED21
Mediator complex subunit 21.
    
 0.907
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
    
 
 0.810
JUND
JunD proto-oncogene, AP-1 transcription factor subunit.
    
 
 0.810
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.