STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXP1Forkhead box P1. (664 aa)    
Predicted Functional Partners:
UEVLD
UEV and lactate/malate dehyrogenase domains.
     
 0.702
CBFB
Core-binding factor subunit beta.
    
 0.634
CD4
CD4 molecule.
      
 0.602
IFNG
Interferon gamma.
   
 0.574
ENSCPUP00000019285
annotation not available
  
 
 
0.571
ENSCPUP00000007434
annotation not available
    
 0.564
ENSCPUP00000007438
annotation not available
    
 0.564
IL10
Interleukin 10.
   
  
 0.564
RUNX2
RUNX family transcription factor 2.
    
 0.541
RUNX1
RUNX family transcription factor 1.
    
 0.541
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.