STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPAMD8C3 and PZP like alpha-2-macroglobulin domain containing 8. (1702 aa)    
Predicted Functional Partners:
KDM2A
Lysine demethylase 2A.
    
 0.737
KDM2B
Lysine demethylase 2B.
    
 0.737
CBX8
Chromobox 8.
    
 0.723
C9
Complement C9.
   
 0.643
CBX4
Chromobox 4.
    
 0.637
CBX2
Chromobox 2.
    
 0.633
CFI
Complement factor I.
   
 0.625
RING1
Ring finger protein 1.
    
 0.623
RNF2
Ring finger protein 2.
    
 0.623
LOC106890667
Polycomb complex protein BMI-1.
    
 0.619
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.