STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLMHBleomycin hydrolase. (455 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
   0.727
KERA
Keratocan.
    
   0.590
ENSCPUP00000021415
annotation not available
      
 0.557
ENSCPUP00000022055
annotation not available
    
   0.550
NUDT13
Nudix hydrolase 13.
    
   0.550
TPP2
Tripeptidyl peptidase 2.
     
 0.526
TMIGD1
Transmembrane and immunoglobulin domain containing 1.
 
      0.519
NPEPPS
Aminopeptidase puromycin sensitive.
    
 0.498
EDF1
Endothelial differentiation related factor 1.
      
 0.485
GCH1
GTP cyclohydrolase 1.
      
 0.482
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.