STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUCA2AGuanylate cyclase activator 2A. (110 aa)    
Predicted Functional Partners:
GUCY2C
Guanylate cyclase 2C.
   
 
 0.856
NPR3
Natriuretic peptide receptor 3.
     
 0.770
TMIGD1
Transmembrane and immunoglobulin domain containing 1.
   
  
 0.712
ENSCPUP00000020466
annotation not available
   
  
 0.485
NPR2
Natriuretic peptide receptor 2.
     
 0.480
GUCY2D
Guanylate cyclase 2D, retinal.
     
 0.480
ENSCPUP00000020662
annotation not available
     
 0.480
ENSCPUP00000020664
annotation not available
     
 0.480
ENSCPUP00000020665
annotation not available
     
 0.480
ENSCPUP00000020669
annotation not available
     
 0.480
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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