STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC119Unc-119 lipid binding chaperone. (145 aa)    
Predicted Functional Partners:
ARL3
ADP ribosylation factor like GTPase 3.
    
 0.986
LOC106891593
ADP-ribosylation factor-like protein 3.
    
 0.956
NPHP3
Nephrocystin 3.
    
 0.728
PDE6D
Phosphodiesterase 6D.
  
   
 0.718
RP2
RP2 activator of ARL3 GTPase.
     
 0.711
C5orf30
Chromosome unknown open reading frame, human C5orf30.
    
 
 0.674
KLC1
Kinesin light chain 1.
    
 0.660
KLC4
Kinesin light chain 4.
    
 0.660
ENSCPUP00000001322
annotation not available
     
 0.631
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.614
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.