STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001373495_00886Unannotated protein. (496 aa)    
Predicted Functional Partners:
GCA_001373495_01849
Unannotated protein.
  
 0.920
GCA_001373495_02930
Unannotated protein.
   
  0.885
GCA_001373495_00887
Unannotated protein.
   
 0.870
GCA_001373495_01800
Unannotated protein.
   
 
  0.847
GCA_001373495_00372
Unannotated protein.
   
  0.773
GCA_001373495_02408
Unannotated protein.
  
 0.754
GCA_001373495_00346
Unannotated protein.
  
  
 
0.728
GCA_001373495_02571
Unannotated protein.
  
  
 
0.703
GCA_001373495_00804
Unannotated protein.
   
 0.695
GCA_001373495_02627
Unannotated protein.
   
 0.690
Your Current Organism:
Arthrobacter koreensis
NCBI taxonomy Id: 199136
Other names: A. koreensis, Arthrobacter koreensis Lee et al. 2003, IFO 16787, JCM 12361, KCTC 9922, NBRC 16787, strain CA15-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.