STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001373495_01391Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_001373495_01392
Unannotated protein.
 0.975
GCA_001373495_00510
Unannotated protein.
 0.889
GCA_001373495_02625
Unannotated protein.
 
 0.887
GCA_001373495_02536
Unannotated protein.
 
 0.886
GCA_001373495_03213
Unannotated protein.
 
 0.880
GCA_001373495_00739
Unannotated protein.
 
 0.878
GCA_001373495_00614
Unannotated protein.
 0.871
GCA_001373495_01416
Unannotated protein.
  
 0.801
GCA_001373495_00945
Unannotated protein.
  
 0.597
GCA_001373495_01324
Unannotated protein.
   
  0.509
Your Current Organism:
Arthrobacter koreensis
NCBI taxonomy Id: 199136
Other names: A. koreensis, Arthrobacter koreensis Lee et al. 2003, IFO 16787, JCM 12361, KCTC 9922, NBRC 16787, strain CA15-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.