STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001373495_01439Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_001373495_01440
Unannotated protein.
  
    0.777
GCA_001373495_01441
Unannotated protein.
       0.776
GCA_001373495_01442
Unannotated protein.
       0.776
GCA_001373495_00237
Unannotated protein.
 
  
 0.644
GCA_001373495_01062
Unannotated protein.
     
 0.642
GCA_001373495_01964
Unannotated protein.
  
    0.629
GCA_001373495_02655
Unannotated protein.
  
 
 0.512
GCA_001373495_03001
Unannotated protein.
    
  0.508
GCA_001373495_01927
Unannotated protein.
   
 
  0.479
GCA_001373495_00177
Unannotated protein.
     
 0.430
Your Current Organism:
Arthrobacter koreensis
NCBI taxonomy Id: 199136
Other names: A. koreensis, Arthrobacter koreensis Lee et al. 2003, IFO 16787, JCM 12361, KCTC 9922, NBRC 16787, strain CA15-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.