STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001373495_02163Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_001373495_02164
Unannotated protein.
 
 
 0.999
GCA_001373495_02160
Unannotated protein.
 
  
 0.960
GCA_001373495_02162
Unannotated protein.
  
  
 0.955
GCA_001373495_01444
Unannotated protein.
 
 
 
 0.936
GCA_001373495_02165
Unannotated protein.
 
    0.886
GCA_001373495_02159
Unannotated protein.
 
  
 0.871
GCA_001373495_02161
Unannotated protein.
       0.800
GCA_001373495_00098
Unannotated protein.
   
  
 0.753
GCA_001373495_02226
Unannotated protein.
     
 0.670
GCA_001373495_01731
Unannotated protein.
     
 0.615
Your Current Organism:
Arthrobacter koreensis
NCBI taxonomy Id: 199136
Other names: A. koreensis, Arthrobacter koreensis Lee et al. 2003, IFO 16787, JCM 12361, KCTC 9922, NBRC 16787, strain CA15-8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.