STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001373495_02336Unannotated protein. (529 aa)    
Predicted Functional Partners:
GCA_001373495_03009
Unannotated protein.
 
 0.999
GCA_001373495_03006
Unannotated protein.
 
  
 0.995
GCA_001373495_02109
Unannotated protein.
    
 0.904
GCA_001373495_02835
Unannotated protein.
  
 
 0.845
GCA_001373495_03007
Unannotated protein.
 
 
 0.833
GCA_001373495_02337
Unannotated protein.
       0.764
GCA_001373495_02222
Unannotated protein.
    
 0.746
GCA_001373495_00337
Unannotated protein.
    
 0.745
GCA_001373495_01682
Unannotated protein.
  
 
 0.745
GCA_001373495_01970
Unannotated protein.
     
 0.726
Your Current Organism:
Arthrobacter koreensis
NCBI taxonomy Id: 199136
Other names: A. koreensis, Arthrobacter koreensis Lee et al. 2003, IFO 16787, JCM 12361, KCTC 9922, NBRC 16787, strain CA15-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.