STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001373495_02847Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_001373495_01268
Unannotated protein.
 
 0.999
GCA_001373495_02848
Unannotated protein.
 0.999
GCA_001373495_02528
Unannotated protein.
 
 0.994
GCA_001373495_02525
Unannotated protein.
  
 
 0.982
GCA_001373495_02527
Unannotated protein.
 
 0.981
GCA_001373495_01963
Unannotated protein.
   
 
 0.969
GCA_001373495_02087
Unannotated protein.
  
 0.964
GCA_001373495_02482
Unannotated protein.
 
 0.951
GCA_001373495_00340
Unannotated protein.
  
 0.945
GCA_001373495_00825
Unannotated protein.
  
 0.945
Your Current Organism:
Arthrobacter koreensis
NCBI taxonomy Id: 199136
Other names: A. koreensis, Arthrobacter koreensis Lee et al. 2003, IFO 16787, JCM 12361, KCTC 9922, NBRC 16787, strain CA15-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.