Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN24218.1 | SFN30631.1 | SAMN04489713_101839 | SAMN04489713_1011082 | Glutamate synthase (NADPH/NADH) large chain. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.774 |
SFN24218.1 | SFN32248.1 | SAMN04489713_101839 | SAMN04489713_1011150 | Glutamate synthase (NADPH/NADH) large chain. | TAT (twin-arginine translocation) pathway signal sequence. | 0.757 |
SFN24218.1 | SFO18225.1 | SAMN04489713_101839 | SAMN04489713_104410 | Glutamate synthase (NADPH/NADH) large chain. | Enoyl-(Acyl carrier protein) reductase. | 0.757 |
SFN24218.1 | SFO58652.1 | SAMN04489713_101839 | SAMN04489713_107279 | Glutamate synthase (NADPH/NADH) large chain. | Methyltransferase domain-containing protein. | 0.910 |
SFN24218.1 | SFO58856.1 | SAMN04489713_101839 | SAMN04489713_107288 | Glutamate synthase (NADPH/NADH) large chain. | Amino acid adenylation domain-containing protein. | 0.810 |
SFN24218.1 | SFO75517.1 | SAMN04489713_101839 | SAMN04489713_109148 | Glutamate synthase (NADPH/NADH) large chain. | [acyl-carrier-protein] S-malonyltransferase. | 0.891 |
SFN24218.1 | SFP04833.1 | SAMN04489713_101839 | SAMN04489713_111170 | Glutamate synthase (NADPH/NADH) large chain. | Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase. | 0.757 |
SFN24218.1 | SFP82694.1 | SAMN04489713_101839 | SAMN04489713_1183 | Glutamate synthase (NADPH/NADH) large chain. | Condensation domain-containing protein. | 0.810 |
SFN24218.1 | SFQ37819.1 | SAMN04489713_101839 | SAMN04489713_12922 | Glutamate synthase (NADPH/NADH) large chain. | 8-amino-7-oxononanoate synthase. | 0.938 |
SFN30631.1 | SFN24218.1 | SAMN04489713_1011082 | SAMN04489713_101839 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glutamate synthase (NADPH/NADH) large chain. | 0.774 |
SFN30631.1 | SFN32248.1 | SAMN04489713_1011082 | SAMN04489713_1011150 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | TAT (twin-arginine translocation) pathway signal sequence. | 0.770 |
SFN30631.1 | SFO18225.1 | SAMN04489713_1011082 | SAMN04489713_104410 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Enoyl-(Acyl carrier protein) reductase. | 0.650 |
SFN30631.1 | SFO58652.1 | SAMN04489713_1011082 | SAMN04489713_107279 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Methyltransferase domain-containing protein. | 0.857 |
SFN30631.1 | SFO58856.1 | SAMN04489713_1011082 | SAMN04489713_107288 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Amino acid adenylation domain-containing protein. | 0.761 |
SFN30631.1 | SFO58974.1 | SAMN04489713_1011082 | SAMN04489713_107293 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Phosphopantetheine attachment site. | 0.745 |
SFN30631.1 | SFO75517.1 | SAMN04489713_1011082 | SAMN04489713_109148 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | [acyl-carrier-protein] S-malonyltransferase. | 0.826 |
SFN30631.1 | SFP04833.1 | SAMN04489713_1011082 | SAMN04489713_111170 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase. | 0.438 |
SFN30631.1 | SFP82694.1 | SAMN04489713_1011082 | SAMN04489713_1183 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Condensation domain-containing protein. | 0.761 |
SFN30631.1 | SFQ37819.1 | SAMN04489713_1011082 | SAMN04489713_12922 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 8-amino-7-oxononanoate synthase. | 0.805 |
SFN32248.1 | SFN24218.1 | SAMN04489713_1011150 | SAMN04489713_101839 | TAT (twin-arginine translocation) pathway signal sequence. | Glutamate synthase (NADPH/NADH) large chain. | 0.757 |
page 1 of 6