STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN19062.1Putative spermidine/putrescine transport system permease protein. (269 aa)    
Predicted Functional Partners:
SFN19043.1
Putative spermidine/putrescine transport system permease protein.
 
 0.992
SFN19023.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.989
SFN19003.1
Putative spermidine/putrescine transport system ATP-binding protein.
 
 0.978
SFN08691.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.965
SFP31719.1
Putative spermidine/putrescine transport system permease protein.
 
 0.964
SFN08711.1
Spermidine/putrescine transport system permease protein.
 
 0.962
SFO19795.1
Putative spermidine/putrescine transport system permease protein.
 
 0.962
SFN09335.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.954
SFP46453.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.954
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.944
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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