Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN17051.1 | SFN21484.1 | SAMN04489713_101511 | SAMN04489713_101716 | Helix-turn-helix domain-containing protein. | Protein of unknown function. | 0.733 |
SFN17051.1 | SFN21504.1 | SAMN04489713_101511 | SAMN04489713_101717 | Helix-turn-helix domain-containing protein. | Purine catabolism regulatory protein. | 0.552 |
SFN17051.1 | SFN92578.1 | SAMN04489713_101511 | SAMN04489713_103449 | Helix-turn-helix domain-containing protein. | Methyltransferase domain-containing protein. | 0.772 |
SFN17051.1 | SFO32494.1 | SAMN04489713_101511 | SAMN04489713_10590 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.773 |
SFN17051.1 | SFO64575.1 | SAMN04489713_101511 | SAMN04489713_108102 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.772 |
SFN17051.1 | SFO89456.1 | SAMN04489713_101511 | SAMN04489713_110166 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.773 |
SFN21449.1 | SFN21468.1 | SAMN04489713_101714 | SAMN04489713_101715 | Protein of unknown function. | FdrA protein. | 0.995 |
SFN21449.1 | SFN21484.1 | SAMN04489713_101714 | SAMN04489713_101716 | Protein of unknown function. | Protein of unknown function. | 0.930 |
SFN21449.1 | SFN21504.1 | SAMN04489713_101714 | SAMN04489713_101717 | Protein of unknown function. | Purine catabolism regulatory protein. | 0.853 |
SFN21449.1 | SFN22177.1 | SAMN04489713_101714 | SAMN04489713_101751 | Protein of unknown function. | Cyanuric acid amidohydrolase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family. | 0.768 |
SFN21449.1 | SFQ29786.1 | SAMN04489713_101714 | SAMN04489713_12677 | Protein of unknown function. | Hypothetical protein. | 0.403 |
SFN21468.1 | SFN21449.1 | SAMN04489713_101715 | SAMN04489713_101714 | FdrA protein. | Protein of unknown function. | 0.995 |
SFN21468.1 | SFN21484.1 | SAMN04489713_101715 | SAMN04489713_101716 | FdrA protein. | Protein of unknown function. | 0.919 |
SFN21468.1 | SFN21504.1 | SAMN04489713_101715 | SAMN04489713_101717 | FdrA protein. | Purine catabolism regulatory protein. | 0.841 |
SFN21468.1 | SFN22177.1 | SAMN04489713_101715 | SAMN04489713_101751 | FdrA protein. | Cyanuric acid amidohydrolase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family. | 0.760 |
SFN21468.1 | SFQ29786.1 | SAMN04489713_101715 | SAMN04489713_12677 | FdrA protein. | Hypothetical protein. | 0.437 |
SFN21484.1 | SFN17051.1 | SAMN04489713_101716 | SAMN04489713_101511 | Protein of unknown function. | Helix-turn-helix domain-containing protein. | 0.733 |
SFN21484.1 | SFN21449.1 | SAMN04489713_101716 | SAMN04489713_101714 | Protein of unknown function. | Protein of unknown function. | 0.930 |
SFN21484.1 | SFN21468.1 | SAMN04489713_101716 | SAMN04489713_101715 | Protein of unknown function. | FdrA protein. | 0.919 |
SFN21484.1 | SFN21504.1 | SAMN04489713_101716 | SAMN04489713_101717 | Protein of unknown function. | Purine catabolism regulatory protein. | 0.887 |
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