STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN22435.1Probable F420-dependent oxidoreductase, Rv3520c family. (363 aa)    
Predicted Functional Partners:
SFN83133.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
 
 0.818
SFN83171.1
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.778
SFO87486.1
Methylenetetrahydromethanopterin reductase.
  
     0.748
SFO37103.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.740
SFP64856.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.740
SFQ39669.1
Probable F420-dependent oxidoreductase, MSMEG_2516 family.
  
     0.727
SFO24026.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.724
SFN47292.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.712
SFO46120.1
Luciferase-like monooxygenase.
  
     0.700
SFN86941.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.676
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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