Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN52210.1 | SFN54564.1 | SAMN04489713_102285 | SAMN04489713_102359 | ferredoxin--NADP+ reductase. | Sirohydrochlorin ferrochelatase. | 0.616 |
SFN52210.1 | SFN54622.1 | SAMN04489713_102285 | SAMN04489713_102361 | ferredoxin--NADP+ reductase. | Hypothetical protein. | 0.892 |
SFN52210.1 | SFN54642.1 | SAMN04489713_102285 | SAMN04489713_102362 | ferredoxin--NADP+ reductase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.961 |
SFN52210.1 | SFN92004.1 | SAMN04489713_102285 | SAMN04489713_103431 | ferredoxin--NADP+ reductase. | Sulfate adenylyltransferase subunit 2. | 0.752 |
SFN52210.1 | SFN92038.1 | SAMN04489713_102285 | SAMN04489713_103432 | ferredoxin--NADP+ reductase. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.729 |
SFN52210.1 | SFN92553.1 | SAMN04489713_102285 | SAMN04489713_103448 | ferredoxin--NADP+ reductase. | Sulfate adenylyltransferase. | 0.793 |
SFN52210.1 | SFO59342.1 | SAMN04489713_102285 | SAMN04489713_107312 | ferredoxin--NADP+ reductase. | precorrin-3B synthase. | 0.797 |
SFN52210.1 | cysH | SAMN04489713_102285 | SAMN04489713_102360 | ferredoxin--NADP+ reductase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.945 |
SFN54564.1 | SFN52210.1 | SAMN04489713_102359 | SAMN04489713_102285 | Sirohydrochlorin ferrochelatase. | ferredoxin--NADP+ reductase. | 0.616 |
SFN54564.1 | SFN54622.1 | SAMN04489713_102359 | SAMN04489713_102361 | Sirohydrochlorin ferrochelatase. | Hypothetical protein. | 0.915 |
SFN54564.1 | SFN54642.1 | SAMN04489713_102359 | SAMN04489713_102362 | Sirohydrochlorin ferrochelatase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.981 |
SFN54564.1 | SFN92004.1 | SAMN04489713_102359 | SAMN04489713_103431 | Sirohydrochlorin ferrochelatase. | Sulfate adenylyltransferase subunit 2. | 0.682 |
SFN54564.1 | SFN92553.1 | SAMN04489713_102359 | SAMN04489713_103448 | Sirohydrochlorin ferrochelatase. | Sulfate adenylyltransferase. | 0.772 |
SFN54564.1 | SFO88929.1 | SAMN04489713_102359 | SAMN04489713_110151 | Sirohydrochlorin ferrochelatase. | uroporphyrinogen-III C-methyltransferase. | 0.996 |
SFN54564.1 | cysH | SAMN04489713_102359 | SAMN04489713_102360 | Sirohydrochlorin ferrochelatase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.980 |
SFN54622.1 | SFN52210.1 | SAMN04489713_102361 | SAMN04489713_102285 | Hypothetical protein. | ferredoxin--NADP+ reductase. | 0.892 |
SFN54622.1 | SFN54564.1 | SAMN04489713_102361 | SAMN04489713_102359 | Hypothetical protein. | Sirohydrochlorin ferrochelatase. | 0.915 |
SFN54622.1 | SFN54642.1 | SAMN04489713_102361 | SAMN04489713_102362 | Hypothetical protein. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.971 |
SFN54622.1 | SFN92004.1 | SAMN04489713_102361 | SAMN04489713_103431 | Hypothetical protein. | Sulfate adenylyltransferase subunit 2. | 0.649 |
SFN54622.1 | SFN92038.1 | SAMN04489713_102361 | SAMN04489713_103432 | Hypothetical protein. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.544 |
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