Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN25304.1 | SFN44837.1 | SAMN04489713_101880 | SAMN04489713_10237 | Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein). | Dienelactone hydrolase. | 0.523 |
SFN25304.1 | SFN54783.1 | SAMN04489713_101880 | SAMN04489713_102367 | Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein). | Predicted phosphoribosyltransferase. | 0.503 |
SFN31040.1 | SFN44837.1 | SAMN04489713_1011099 | SAMN04489713_10237 | Hypothetical protein. | Dienelactone hydrolase. | 0.822 |
SFN31040.1 | SFN54783.1 | SAMN04489713_1011099 | SAMN04489713_102367 | Hypothetical protein. | Predicted phosphoribosyltransferase. | 0.886 |
SFN44785.1 | SFN44803.1 | SAMN04489713_10235 | SAMN04489713_10236 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | CBS domain-containing protein. | 0.610 |
SFN44785.1 | SFN44837.1 | SAMN04489713_10235 | SAMN04489713_10237 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Dienelactone hydrolase. | 0.610 |
SFN44803.1 | SFN44785.1 | SAMN04489713_10236 | SAMN04489713_10235 | CBS domain-containing protein. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.610 |
SFN44803.1 | SFN44837.1 | SAMN04489713_10236 | SAMN04489713_10237 | CBS domain-containing protein. | Dienelactone hydrolase. | 0.773 |
SFN44803.1 | gcvP | SAMN04489713_10236 | SAMN04489713_106363 | CBS domain-containing protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.503 |
SFN44837.1 | SFN25304.1 | SAMN04489713_10237 | SAMN04489713_101880 | Dienelactone hydrolase. | Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein). | 0.523 |
SFN44837.1 | SFN31040.1 | SAMN04489713_10237 | SAMN04489713_1011099 | Dienelactone hydrolase. | Hypothetical protein. | 0.822 |
SFN44837.1 | SFN44785.1 | SAMN04489713_10237 | SAMN04489713_10235 | Dienelactone hydrolase. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.610 |
SFN44837.1 | SFN44803.1 | SAMN04489713_10237 | SAMN04489713_10236 | Dienelactone hydrolase. | CBS domain-containing protein. | 0.773 |
SFN44837.1 | SFN52277.1 | SAMN04489713_10237 | SAMN04489713_102287 | Dienelactone hydrolase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.559 |
SFN44837.1 | SFN54783.1 | SAMN04489713_10237 | SAMN04489713_102367 | Dienelactone hydrolase. | Predicted phosphoribosyltransferase. | 0.981 |
SFN44837.1 | SFO48853.1 | SAMN04489713_10237 | SAMN04489713_106289 | Dienelactone hydrolase. | Uncharacterized conserved protein, DUF2267 family. | 0.536 |
SFN44837.1 | SFO58387.1 | SAMN04489713_10237 | SAMN04489713_107268 | Dienelactone hydrolase. | Phosphopantetheine attachment site. | 0.515 |
SFN44837.1 | SFP20593.1 | SAMN04489713_10237 | SAMN04489713_112138 | Dienelactone hydrolase. | Erythromycin esterase. | 0.520 |
SFN44837.1 | gcvP | SAMN04489713_10237 | SAMN04489713_106363 | Dienelactone hydrolase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.528 |
SFN52277.1 | SFN44837.1 | SAMN04489713_102287 | SAMN04489713_10237 | 3-hydroxyacyl-CoA dehydrogenase. | Dienelactone hydrolase. | 0.559 |
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