Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN24218.1 | SFN24341.1 | SAMN04489713_101839 | SAMN04489713_101843 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate or tyrosine decarboxylase. | 0.906 |
SFN24218.1 | SFN59419.1 | SAMN04489713_101839 | SAMN04489713_102518 | Glutamate synthase (NADPH/NADH) large chain. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.820 |
SFN24218.1 | SFO58652.1 | SAMN04489713_101839 | SAMN04489713_107279 | Glutamate synthase (NADPH/NADH) large chain. | Methyltransferase domain-containing protein. | 0.910 |
SFN24218.1 | SFO58856.1 | SAMN04489713_101839 | SAMN04489713_107288 | Glutamate synthase (NADPH/NADH) large chain. | Amino acid adenylation domain-containing protein. | 0.810 |
SFN24218.1 | SFP82694.1 | SAMN04489713_101839 | SAMN04489713_1183 | Glutamate synthase (NADPH/NADH) large chain. | Condensation domain-containing protein. | 0.810 |
SFN24218.1 | SFP84447.1 | SAMN04489713_101839 | SAMN04489713_11858 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate or tyrosine decarboxylase. | 0.906 |
SFN24218.1 | gcvP | SAMN04489713_101839 | SAMN04489713_106363 | Glutamate synthase (NADPH/NADH) large chain. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.968 |
SFN24341.1 | SFN24218.1 | SAMN04489713_101843 | SAMN04489713_101839 | Glutamate or tyrosine decarboxylase. | Glutamate synthase (NADPH/NADH) large chain. | 0.906 |
SFN24341.1 | SFN59419.1 | SAMN04489713_101843 | SAMN04489713_102518 | Glutamate or tyrosine decarboxylase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.874 |
SFN24341.1 | SFO58652.1 | SAMN04489713_101843 | SAMN04489713_107279 | Glutamate or tyrosine decarboxylase. | Methyltransferase domain-containing protein. | 0.787 |
SFN24341.1 | gcvP | SAMN04489713_101843 | SAMN04489713_106363 | Glutamate or tyrosine decarboxylase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.771 |
SFN59419.1 | SFN24218.1 | SAMN04489713_102518 | SAMN04489713_101839 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.820 |
SFN59419.1 | SFN24341.1 | SAMN04489713_102518 | SAMN04489713_101843 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate or tyrosine decarboxylase. | 0.874 |
SFN59419.1 | SFN59478.1 | SAMN04489713_102518 | SAMN04489713_102520 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Maleate cis-trans isomerase. | 0.850 |
SFN59419.1 | SFN59510.1 | SAMN04489713_102518 | SAMN04489713_102521 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Maleate isomerase. | 0.799 |
SFN59419.1 | SFN59541.1 | SAMN04489713_102518 | SAMN04489713_102522 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Protein of unknown function. | 0.815 |
SFN59419.1 | SFO58652.1 | SAMN04489713_102518 | SAMN04489713_107279 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Methyltransferase domain-containing protein. | 0.907 |
SFN59419.1 | SFO58856.1 | SAMN04489713_102518 | SAMN04489713_107288 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Amino acid adenylation domain-containing protein. | 0.817 |
SFN59419.1 | SFP82694.1 | SAMN04489713_102518 | SAMN04489713_1183 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Condensation domain-containing protein. | 0.817 |
SFN59419.1 | SFP84447.1 | SAMN04489713_102518 | SAMN04489713_11858 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate or tyrosine decarboxylase. | 0.942 |
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