STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN62626.1Peptide/nickel transport system substrate-binding protein. (527 aa)    
Predicted Functional Partners:
SFN62560.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 0.993
SFN62595.1
Peptide/nickel transport system permease protein.
 0.987
SFN62530.1
Peptide/nickel transport system ATP-binding protein.
 
 0.967
SFN62659.1
CubicO group peptidase, beta-lactamase class C family.
     0.920
SFN62482.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
     0.918
SFN62448.1
Glutamate carboxypeptidase.
     0.910
SFO54986.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.908
SFQ18219.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.902
SFN62311.1
DNA-binding transcriptional regulator, PucR family.
 
    0.864
SFP69413.1
Peptide/nickel transport system ATP-binding protein.
 
 0.862
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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