STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN84125.1Protein of unknown function. (231 aa)    
Predicted Functional Partners:
SFN84013.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.956
SFN84088.1
Protein of unknown function.
 
     0.951
SFN84162.1
Hypothetical protein.
 
     0.949
SFN84050.1
MoxR-like ATPase.
 
     0.859
SFN83976.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.785
SFN83942.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.780
SFO21580.1
Arginine/lysine/ornithine decarboxylase.
   
 
 0.583
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.515
SFO59259.1
Magnesium chelatase subunit D.
  
 
 0.512
SFP08777.1
Protoporphyrin IX magnesium-chelatase.
  
 
 0.512
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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