STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO16551.1Dihydrolipoamide dehydrogenase. (490 aa)    
Predicted Functional Partners:
SFO65040.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.998
SFO49258.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.984
SFN18170.1
2-oxoglutarate dehydrogenase E2 component.
 0.967
SFP04036.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.938
SFN48827.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.937
SFP83763.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.935
SFP90580.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.935
SFO20533.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.934
SFP03923.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.917
SFN48857.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 0.913
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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