STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO23351.1Serine/threonine protein kinase. (579 aa)    
Predicted Functional Partners:
SFQ26116.1
Protein phosphatase.
 
 0.837
SFQ02871.1
Serine/threonine protein phosphatase PrpC.
 
  0.798
SFO23328.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.732
SFO50008.1
Zinc-ribbon domain-containing protein.
  
 
 
 0.719
SFQ44109.1
Hypothetical protein.
  
     0.671
SFP02886.1
Serine/threonine protein phosphatase PrpC.
  
  0.635
SFN19905.1
Serine/threonine protein kinase.
 
 
0.624
SFQ26030.1
Serine/threonine protein kinase.
 
 
0.622
SFO23372.1
Beta-glucosidase.
    
  0.602
SFQ39322.1
Hypothetical protein.
    
 0.569
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.