STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO48965.1Glycosyltransferase involved in cell wall bisynthesis. (405 aa)    
Predicted Functional Partners:
SFO48945.1
D-sedoheptulose 7-phosphate isomerase.
 
 0.991
SFO49019.1
Histidinol-phosphate phosphatase family domain-containing protein/HAD-superfamily hydrolase, subfamily IIIA.
 
 0.966
SFO49000.1
ADP-heptose:LPS heptosyltransferase.
 
 
 0.958
SFO48889.1
ADP-heptose:LPS heptosyltransferase.
 
 
 0.956
SFO48926.1
rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.950
SFO48984.1
Glycosyl transferases group 1.
 
     0.946
SFO48907.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.940
SFO49037.1
Carbamoyltransferase.
 
   
 0.923
SFP60720.1
D-sedoheptulose 7-phosphate isomerase.
 
 0.888
SFO48872.1
dTDP-glucose 4,6-dehydratase.
 
 
  0.881
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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