STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO49398.1Thioredoxin reductase. (450 aa)    
Predicted Functional Partners:
SFO65040.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.998
SFO49382.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  0.996
SFP67705.1
Sarcosine oxidase subunit beta.
  0.989
SFO49417.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
  0.988
SFO49352.1
Glycine/D-amino acid oxidase.
 
  0.986
SFO49258.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.984
SFP67763.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
  0.971
SFO49434.1
Proline racemase; Belongs to the proline racemase family.
 
  
  0.955
SFN18170.1
2-oxoglutarate dehydrogenase E2 component.
  
 0.909
SFN48827.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.909
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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