STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO67173.1iron(III) transport system substrate-binding protein. (372 aa)    
Predicted Functional Partners:
SFO67154.1
iron(III) transport system permease protein.
 
 
 0.994
SFO53917.1
iron(III) transport system permease protein.
 
 
 0.977
SFO67138.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.913
SFO67104.1
Protein of unknown function.
       0.779
SFO67119.1
Protein of unknown function.
       0.779
SFO18332.1
Putative spermidine/putrescine transport system permease protein.
  
 
  0.725
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.631
SFN19003.1
Putative spermidine/putrescine transport system ATP-binding protein.
  
 
 0.631
SFN26785.1
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.631
SFO18304.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.631
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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