STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO64383.1Glyoxylase, beta-lactamase superfamily II. (329 aa)    
Predicted Functional Partners:
SFN31092.1
Glyoxylase, beta-lactamase superfamily II.
  
  0.723
SFO74051.1
Glyoxylase, beta-lactamase superfamily II.
  
  0.723
SFO67945.1
Adenylyltransferase and sulfurtransferase.
  
 0.707
SFN32096.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
  
 0.698
SFN20017.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
   
 0.633
SFO64452.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.587
SFO64368.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.570
SFO58652.1
Methyltransferase domain-containing protein.
   
 0.562
SFQ37819.1
8-amino-7-oxononanoate synthase.
   
 0.555
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.514
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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