STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO72817.1Protein N-acetyltransferase, RimJ/RimL family. (188 aa)    
Predicted Functional Partners:
SFN24218.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.726
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.722
SFP59761.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.718
SFO45201.1
L-ornithine N5-oxygenase.
  
 
 0.668
SFQ36223.1
L-ornithine N5-oxygenase.
  
 
 0.668
SFO89235.1
[SSU ribosomal protein S5P]-alanine acetyltransferase.
  
     0.626
SFO14089.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.609
SFO30491.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.607
SFO72846.1
Membrane protein.
       0.601
SFO09615.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.588
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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